Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., MscS mechanosensitive ion channel from Marinobacter adhaerens HP15

 Score =  228 bits (580), Expect = 1e-64
 Identities = 116/257 (45%), Positives = 164/257 (63%), Gaps = 2/257 (0%)

Query: 29  LLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVL 88
           L++ Y   V+ AI+ L +G  ++    G + N L KK  D  +  F+ GL+   L I++L
Sbjct: 21  LVMTYAPKVVLAIVTLIVGMWLINRFVGVLDNKLGKK--DPTLNKFLCGLIGAILKILLL 78

Query: 89  IAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVA 148
           I+  S +G+ T S +A+IGAAGLAVGLALQGSL+NFA GVLI+ F+PFK GD ++  G  
Sbjct: 79  ISVASMVGIATTSFIAIIGAAGLAVGLALQGSLANFAGGVLILIFKPFKVGDTIDAQGYL 138

Query: 149 GSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQKTK 208
           GSV  I I  T++ + DN+ +V+PN  +   ++TN S +ETRR DM  G+ Y  D+ K K
Sbjct: 139 GSVREISILYTIVDTFDNRRIVIPNGQLANASLTNLSAYETRRCDMSFGIGYGDDIDKAK 198

Query: 209 RVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKEALD 268
            V +  +E+D R LKDP+  I V  L +SS++  VR W K+ D W  Y+D  + +K+A D
Sbjct: 199 AVCKRLIEEDERALKDPEPLIVVGALGESSVDLTVRAWTKSGDLWPFYWDMHEKVKKAFD 258

Query: 269 ANGIEIPFPQMDVHLNK 285
           A GI IPFPQ DVH+ K
Sbjct: 259 AEGISIPFPQRDVHMIK 275