Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., MscS mechanosensitive ion channel from Marinobacter adhaerens HP15

 Score =  137 bits (346), Expect = 3e-37
 Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 5/223 (2%)

Query: 67  MDKAVVDFIHGLVRYTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAA 126
           MD ++   +  L       + ++  L++ G    S++A +G  G+AVG A Q +LSNF A
Sbjct: 149 MDPSIRQLVENLFAVIAATLAVVTVLAQFGFDVVSIIAGLGIVGIAVGFAAQSTLSNFIA 208

Query: 127 GVLIVAFRPFKSGDYVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSR 186
           G+ ++  RPF+ GD+V I G  G V  I +  T L++ DN   ++PN +V    I NYS 
Sbjct: 209 GITLLIERPFRIGDWVTINGQEGKVVKIALRTTWLRTRDNIFTMIPNDSVASTDIINYSA 268

Query: 187 HETRRVDMVIGVSYKSDLQKTKRVLRETLEKDPRILKDPDMTIGVL--TLADSSINFVVR 244
               R+++ +G++YK   +  + VL   L   P +L+   M   VL  +L DSS+N  V+
Sbjct: 269 EGVTRLNIPVGIAYKESAKAAREVLMPVLLAHPEVLQGAGMEPRVLLKSLGDSSVNLEVK 328

Query: 245 PWCKTSDYWA---VYFDSMQAIKEALDANGIEIPFPQMDVHLN 284
            W    +      +  D ++ +KEALDA GIEIPFP + + ++
Sbjct: 329 VWITPDNLDVRPRIMADILEQMKEALDAAGIEIPFPHLQLFID 371