Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MscS Mechanosensitive ion channel (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 61/252 (24%), Positives = 120/252 (47%), Gaps = 4/252 (1%)

Query: 28  DLLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIV 87
           D  +    ++++A+LIL +  L+ + V      +L+ +     + D +  L+   +F+I 
Sbjct: 137 DQAVAAAPSILAAVLILPLALLLSRLVGRLARWMLRGRVRSPFLGDVLARLIALPVFLIG 196

Query: 88  LIAALSRIGVQ--TASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIG 145
           +   L   G+     S++   G  G+ +G A +    NF A +L+   +PF   D V +G
Sbjct: 197 VYVVLQVAGLTQLALSLIGGAGIVGIVIGFAFRDIAENFLASLLLSIRQPFHRNDVVRVG 256

Query: 146 GVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQ 205
              G V S+    TVL SP+   + +PN+ V    I NY+   +RR    +GV Y   + 
Sbjct: 257 EHLGVVHSMNTRSTVLVSPEGNHIQIPNAQVFKTTIENYTTSASRRETFTVGVGYDVPIS 316

Query: 206 KTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDS--MQAI 263
           + + ++ E L     +++DP+  +   +L  +++N +V  W   +    +   S  ++ +
Sbjct: 317 EVQDIILEVLRGHEAVVQDPEPMVLADSLGAATVNVMVYFWFDGARVSPIKLRSALIRRV 376

Query: 264 KEALDANGIEIP 275
           K+AL   G+ +P
Sbjct: 377 KQALTEAGVSMP 388