Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., small-conductance mechanosensitive channel mcsS from Caulobacter crescentus NA1000

 Score =  169 bits (429), Expect = 6e-47
 Identities = 97/254 (38%), Positives = 142/254 (55%), Gaps = 3/254 (1%)

Query: 10  VPIVESFNQVNTWLTNNSDLLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKK---KE 66
           +P + +     T L++  D L +  VN++ A LIL +        A  +   L +     
Sbjct: 14  LPSLANVKADETMLSHFIDWLGKLAVNLVVAALILAVTFWAAGWAARFMRRTLTRVHRSN 73

Query: 67  MDKAVVDFIHGLVRYTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAA 126
            D  +  F   L RY +  + L+A L ++GVQ  S++AV+GAA LA+GLALQG+LSN AA
Sbjct: 74  PDPTLESFAASLARYAIVAVGLVAVLQQLGVQATSIIAVLGAASLAIGLALQGALSNVAA 133

Query: 127 GVLIVAFRPFKSGDYVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSR 186
           GV+I+ FRP+K GD++E     G+V S+ +  T + +PDN  V++PNS V G  I NYS 
Sbjct: 134 GVMILLFRPYKVGDFIETATRQGTVKSLDLLFTEIATPDNVKVMIPNSKVFGDVILNYST 193

Query: 187 HETRRVDMVIGVSYKSDLQKTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPW 246
           H  RRVD++  V  K+DL    + LRE  E D RI +DP   I V  L+++     +R W
Sbjct: 194 HRNRRVDVLFKVPLKTDLVAVLKRLRERAENDARIRQDPAPMIEVTDLSEAYAQAAIRVW 253

Query: 247 CKTSDYWAVYFDSM 260
              +D+  V  D M
Sbjct: 254 TAAADFGPVKTDLM 267