Pairwise Alignments

Query, 341 a.a., D-erythrose-4-phosphate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  167 bits (422), Expect = 7e-46
 Identities = 106/344 (30%), Positives = 195/344 (56%), Gaps = 15/344 (4%)

Query: 4   VAINGFGRIGRNVLRAVYE-SGKRDRIQVVAV----NELAKPDAMAHLLQYDTSHGRFGK 58
           V + GFGRIGR + R + E +G+ +++++ A+     +    +  A LL+ D+ HG F  
Sbjct: 129 VVLYGFGRIGRLLARLLIERTGRSNKLRLRAIVLRGGKKGDLEKRASLLRRDSVHGPFNG 188

Query: 59  KISHDQQHIYVHHQNGEYDSIRILHLSEIPLLPWRDLGVD--LVLDCTGVYGCQEDGQQH 116
            +  D+++  +   NG Y  I++++ +    + +   G++  LV+D TG++  +     H
Sbjct: 189 SVEVDEENNAII-ANGTY--IQVIYANSPDEVDYTKYGINDALVVDNTGIWKDEAGLGLH 245

Query: 117 IDA-GAKLVLFSHPGASDLDNTIIYGVNHETLTAEHKIVSNGSCTTNCIVPIIKVLDDAF 175
           + + GA  VL + P    + N I+YGVN   +T E  IVS  SCTTN I P++K ++D +
Sbjct: 246 LKSPGASKVLLTAPAKGAIKN-IVYGVNEGDITPEDIIVSAASCTTNAITPVLKAVNDKY 304

Query: 176 GIDSGTITTIHSSMNDQQVIDAYHNDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFE 235
           GI++G + TIHS  NDQ +ID YH+  RR R+A  +++  +T   K + +  P  + K  
Sbjct: 305 GIENGHVETIHSYTNDQNLIDNYHSADRRGRSAPLNMVITETGAAKAVAKALPVLAGKLT 364

Query: 236 AISVRVPTVNVTAMDLSVTIKSNVKVNDVNQTIVN-ASQCTLRGIVDYTEA-PLVSIDFN 293
             ++RVPT NV+   +S+ + +    +++N+ + + A Q  L+  +DYT++  +VS D  
Sbjct: 365 GNAIRVPTPNVSMAIISMNLNAETNKDELNEYLKDTALQSPLQNQIDYTDSTEIVSSDLV 424

Query: 294 HDPHSAIVDGTQTRVSNGQLVKMLVWCDNEWGFANRMLDTALAM 337
              ++ +VD +Q  ++ G+   + VW DNE+G++ +++     M
Sbjct: 425 GSRYAGVVD-SQATIAEGKRAILYVWYDNEFGYSCQVVGVMQTM 467