Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., TonB-dependent vitamin B12 receptor from Pseudomonas stutzeri RCH2

 Score =  137 bits (344), Expect = 2e-36
 Identities = 173/639 (27%), Positives = 273/639 (42%), Gaps = 86/639 (13%)

Query: 33  ETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSVPGVTVT---GGGDTTD 89
           +  VVTA   AQ  Q + A+++VI RE +E      + + LK VPGV++    G G +T 
Sbjct: 33  QQQVVTATRTAQTAQQSLAAVTVIDRERIERSQASSLPELLKQVPGVSLANNGGPGKSTS 92

Query: 90  ISIRGMGSNYTLILVDGKRQTSRQTRPNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYG 149
           + +RG  S++ L+++DG +  S     +  G  ++     PL+ IERIEV+RGP S+LYG
Sbjct: 93  LFMRGTESDHVLVMIDGIKIGS----VSGGGAALQD---LPLELIERIEVVRGPRSSLYG 145

Query: 150 SDAIGGVINIITRKDQQQW------SGNVQLSTVVQENRASGDEQSANFFVTGPLSDALS 203
           S+AIGGVI I TRK Q Q       +G     T       SG +    + +    SD   
Sbjct: 146 SEAIGGVIQIFTRKGQGQGVKPFFSAGYGTHDTYTGSAGVSGGDGRGWYSLGVSGSDTDG 205

Query: 204 LQVYGQTT---QRDEDEIEHGYGDKSLRSLTSKLNYQLNPDHQLQLEAGVSAQDRENNVG 260
           + V    T   +RD D    GY     R+L++ L+     D+ L+L+A +  Q + +N  
Sbjct: 206 INVKSADTSGYERDAD----GY-----RNLSATLSAGYRFDNGLELDANL-LQAKSHNDY 255

Query: 261 KSAQSSGCRGTCSNTDNQYR--RNHVAVSHQGDW----QDVGQSDTYLQYEENTNKSREM 314
            S   +   G  +N D + R        S    W    Q     D    Y++    SR  
Sbjct: 256 DSVNRARTSGFGANADGESRVFGTRARFSPLEPWLVTLQAGRSEDKSDAYQDGQFYSRFD 315

Query: 315 SIDNTVFKSTLVAPIGEHMLSFGVEGKHESLEDKTSNKISSRTHISN-TQWAGFI-EDEW 372
           S  +T+     +     H L  G + + + +   T     SR +     Q+ G +   +W
Sbjct: 316 SRRDTLSWQNDIELAAGHTLILGADHQRDEVNGTTVYAEDSRDNDGYFAQYLGEVGRHDW 375

Query: 373 ALAEQFRLTFGGRLDHDKNYGSHFSPRV-YGVWNLDPLWTVKGGVS--TGFRAPQLREV- 428
            L+         R D ++ +G H +  + YG    D  W ++G +S  T F+AP   E+ 
Sbjct: 376 QLSL--------RRDDNEQFGQHDTGNIGYGYALTD--W-LRGTISYGTAFKAPTFNELY 424

Query: 429 TPDWGQVSGGGNIYGNPDLKPETSINKELSLMYSTGSGLAASLTAFHNDFKDKITRVACP 488
            PD          YGNP+L  ETS + E+ L    G G  A + A+     D I      
Sbjct: 425 FPD----------YGNPELDAETSESLEVGLAGQHGWGHWA-VNAYRTVVDDLIA----- 468

Query: 489 ANICTAGPNQWGAAPTYRVNIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKS-GNF 547
                     + A+ +   N+ EA   G E  L   +    + +++Y+    E +S G  
Sbjct: 469 ----------YDASISAPANVQEARIRGVELVLGSQLL-GWDWNANYSLLEPENRSAGAN 517

Query: 548 AGRPLLQLPKHLFNANLSWQTTDRLNSWANLNYRGKEMQPEGGASNDDFIAPSYTFIDTG 607
            G  L +  K LFN +L  +     +  A+L+  G+                 Y  +D  
Sbjct: 518 RGNELARRAKQLFNLDLD-RRLGAFSVGASLHAEGQRYDDLANTRE----LSGYATLDLR 572

Query: 608 VTYALTDTATIKAAVYNLFDQEVNYAEYGYVEDGRRYWL 646
             Y +T    ++A V NL D +   AE GY + G+  +L
Sbjct: 573 GEYRITPEWRLQARVANLLDADYETAE-GYNQPGQAAYL 610