Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., heme transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (254), Expect = 6e-26
 Identities = 140/629 (22%), Positives = 252/629 (40%), Gaps = 91/629 (14%)

Query: 5   NPSPVSLSVTLGLMFSASAFAQDA-------------------TKTDETMVVTAAGYAQV 45
           N  P+ ++V + L  +A +FA  A                   T+ DE +V +A   ++ 
Sbjct: 2   NKKPLVIAVAMALSSTALSFALAAEEGVKPTAVQKSAEQGVVETEFDEVLV-SATRLSEK 60

Query: 46  IQNAPASISVISREDLESRYYRDVTDALKSVPGVTVTGGGDTTD--ISIRGMGSNYTLIL 103
           +     S++V++ E L       V + LK+   + +T G   T   + IRG+  +  L  
Sbjct: 61  VSETSRSVAVVAEEQLNVSQASSVAEVLKNEANINLTNGPRATSQGVEIRGLSGDRVLQT 120

Query: 104 VDGKRQTSRQTRPNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRK 163
           +DG RQ +          G    +    + ++ IEVIRGP S+L+GS A+GGV+   T+ 
Sbjct: 121 IDGARQNTSS--------GHRGSYFMDPELLKSIEVIRGPASSLWGSGALGGVVAQNTKS 172

Query: 164 DQQQWSGNVQLSTVVQEN-RASGDEQSANFFVTGPLSDALSLQVYGQTTQRDEDEIEHGY 222
            Q   + N      +++    +GD    +  V G      ++      +  D + I  G 
Sbjct: 173 AQDFLAPNETFGGYLKQGYDTNGDRTKTSGAVYG---QQATVDWLLNGSYFDSNNINTGN 229

Query: 223 GDKSLRSLTS------KLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTD 276
            +  + S +S      K  +Q +   +L L A V   ++ N +  S  S+    +     
Sbjct: 230 DETLVNSASSGSSGLAKFGWQADEASRLALSARV---NKINELVPSNPSAAVSSSVPLVR 286

Query: 277 NQYRRNHVAVSHQGDWQDVGQSDTYLQYEENT-----NKSREMSIDNTVFKSTLV----- 326
            +    ++ +++     +    DT+LQ   N+     ++  +  +D+T +++  +     
Sbjct: 287 RKTDDQNITLNYSLAPANNPYLDTHLQVYWNSTDYDEDRVTKGQLDSTEYRTVGINLNNS 346

Query: 327 APIGEHMLSFGVEGKHESLEDKTSNK--ISSRTHI---SNTQWAGFIEDEWALAEQFRLT 381
           + +G   L++GV+G  ++L+    +K  +  R        T W  F   +  L +   L 
Sbjct: 347 SQLGNTKLTYGVDGYRDTLKTVRDDKGQVGQRPEDIDGETTVWGAFTRADVQLTQTVNLD 406

Query: 382 FGGRLDHDKNYG---------SHFSPRVYGVWNLDPLWTVKGGVSTGFRAPQLRE----- 427
              R D  KN           +  SP +   W   P  T+       FRAP + E     
Sbjct: 407 AALRYDSFKNQSHNLNASADDTELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSSG 466

Query: 428 ----VTPDWGQVSGG--GNIYGNPDLKPETSINKELSLMY-----STGSGLAASLTAFHN 476
               + P  G +  G       NP+LK E + NKEL   +     +    LA +L  F N
Sbjct: 467 THYCIPPIPGFLPKGLCNTFATNPNLKSEVARNKELKADFRFNELAGDDELAITLNIFRN 526

Query: 477 DFKDKITRVACPANICTAGPNQWGAAPTYRVNIDEAETYGAEATLSLPITESVELSSSYT 536
           D  D I +          G  Q     T   N+++A+  G E +    I ++  L+ +Y 
Sbjct: 527 DVDDFIVQQVSNPYRGIPGLEQ----TTSWNNVEDAQLTGFELSGRYRIGQT-RLAMNYG 581

Query: 537 YTHSEQKSGNFAGRPLLQLPKHLFNANLS 565
            T  E ++    G  +  +P + FN +LS
Sbjct: 582 QTRGEDRN---TGDYIEGMPANKFNVDLS 607