Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., TonB-dependent outer membrane channel from Caulobacter crescentus NA1000

 Score =  145 bits (365), Expect = 8e-39
 Identities = 172/751 (22%), Positives = 292/751 (38%), Gaps = 117/751 (15%)

Query: 1   MSRFNPSPVSLSVTLGLMFSASAFAQDATKTD------ETMVVTAAGYAQVIQNAPASIS 54
           MSR   + V+ + T  LM  A+A   DA K +      + + VTA    + +  APAS++
Sbjct: 1   MSRLKLAAVAAASTAVLM--ATAARADAVKPEADAVEVDKVTVTATRSEKALSKAPASVT 58

Query: 55  VISREDLESRYYRDVTDALKSVPGVTV-------------TGGGDTTDISIRGMGSNYTL 101
           VIS +++E    +D+ D ++  PGV+V             TG       +IRG+  N  L
Sbjct: 59  VISGQEIEDGLIKDIKDLVRDEPGVSVRSAPARFTAAGASTGRDGNAGFNIRGLEGNRVL 118

Query: 102 ILVDGKRQTSRQTRPNSDGPG---IEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVIN 158
           I+VDG R       P+S   G   + +G    L  ++ +E++RGP S LYGSD + G ++
Sbjct: 119 IVVDGVRV------PDSFAFGAQSVGRGDHVDLDTLKSVEIVRGPASALYGSDGLAGSVS 172

Query: 159 IITRKDQQQWSGNVQLSTVVQENRASGDE----------QSANF--FVTGPLSDALSLQV 206
            IT+            +   +   AS D+          QS  +   +T    D    + 
Sbjct: 173 FITKDPSDIVKAGETFAGRARIGYASADQSWTESVLLAGQSGRWQGLLTYTRRDGEGQKT 232

Query: 207 YGQTTQRDEDEIEHGYGDKSLRSLTSKLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSS 266
            G     + D       D    ++ +KL Y  N +++++L      +D +  V  +    
Sbjct: 233 AGTNNAANTDRTTANPEDNQSNAILAKLIYSPNDNNRIRLTVDHLDRDVDWTVLSAIAKP 292

Query: 267 GCRGTC---SNTDNQYRRNHVAVSHQGDWQD--VGQSDTYLQYEENTNKSREMSIDNTVF 321
               T        ++ +R+ V V H+ D     +  + T L ++++T +       NT  
Sbjct: 293 PLAATSVIGMTAFDKVKRDRVTVDHRFDGGQGLIDTAQTTLYWQKSTTRQFSAEDRNTAA 352

Query: 322 KSTLVAPIGEHMLSFGVEGKHESLEDKTSNKISSRTHISNTQWAG--------------- 366
             T  A     +    VE      +   ++++      S T+ +G               
Sbjct: 353 DRTRDATFNNRVFGGSVELHSRFDQGAVTHEVVWGGDASITRQSGTRDGTVPPVGESFPA 412

Query: 367 -------------FIEDEWALAEQFRLTF--GGRLDHDK---------------NYGSHF 396
                        +++DE  +    RLT     R D+ K                  SH 
Sbjct: 413 KAFPTTDFTLGGLYVQDEIKVG---RLTLYPALRFDYYKLDPKADPLFHASAAGQSDSHL 469

Query: 397 SPRVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDWGQVSGGGNIYGNPDLKPETSINKE 456
           SP++  VW    + TV    +TGF+AP   +V   +           NPDLKPETS   E
Sbjct: 470 SPKLGLVWEASDVVTVFANAATGFKAPSPSQVNTGFSNPVSNYQSISNPDLKPETSRTLE 529

Query: 457 LSLMYSTGSGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRVNIDEAETYG 516
             L  + G    AS+  F  ++ D I +V    N   A P     A    VN+      G
Sbjct: 530 AGLRLAQGR-WRASVAGFTGEYDDFIEQVQVGGNFTAASP-----AVYQYVNLSGVTISG 583

Query: 517 AEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQT-TDRLNSW 575
           AEA  S+ +       +   Y     K+ N    PL+ +        ++++  + R    
Sbjct: 584 AEAKGSVDLGGGFTARAGVAYAKGSSKA-NGVTTPLVSIDPVKITGGVAYRAPSGRFGGD 642

Query: 576 ANLNYRGKEMQPEGG--ASNDDFIAPSYTFIDTGVTYALTDTATIKAAVYNLFDQE---- 629
             + +  ++     G   +   FI  ++T  D    +A+TDT T++A V+NL D++    
Sbjct: 643 LAVIHADRKSASRAGVTCAGGCFIPAAFTVADATAWWAVTDTVTLRAGVFNLTDEKYWWW 702

Query: 630 --------VNYAEYGYVEDGRRYWLGLDIAF 652
                    +  +  Y + GR Y + L + F
Sbjct: 703 SDVRGLSNTSTVKDAYSQPGRNYSVSLALKF 733