Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score =  296 bits (758), Expect = 2e-84
 Identities = 213/680 (31%), Positives = 344/680 (50%), Gaps = 65/680 (9%)

Query: 1   MSRFNPSPVSLSVTLGLM-FSASAFAQD-ATKTDETMVVTAAGYAQVIQNAPASISVISR 58
           +SRF+   + L+++LGL   SA+A A + AT   E MV+TA        +APAS+SVI+R
Sbjct: 11  LSRFSRKALPLAISLGLSAISATALANNSATGEMERMVITATQTKHSELSAPASVSVINR 70

Query: 59  EDLESRYYRDVTDALKSVPGVTVTGGGD--TTDISIRGMGSNYTLILVDGKRQTSRQTRP 116
            +LE+    D+  A++ + GV ++ G      +IS+RG+ S+YTLIL++G+R  SR+   
Sbjct: 71  TELEALVIDDLASAVRYLQGVNISEGTPYGRNEISLRGLDSDYTLILINGRRVNSREALT 130

Query: 117 NSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQLST 176
           ++ G   +   +P + AIERIE++RGPMS+LYGS+A+GGV+N+I R+  + W  +V +  
Sbjct: 131 SNYGNDFDLSSIP-MSAIERIELVRGPMSSLYGSEALGGVVNVILRQPTETWQTSVGVQY 189

Query: 177 VVQENRASGDEQSANFFVTGPL-SDALSLQVYGQTTQRDE---------DEIEHGYGDKS 226
               +   GD    NF+ +G L  D L   +   + +RD          D +E    D+ 
Sbjct: 190 DTPTSGEGGDSTKYNFYTSGALVKDKLLANLIVDSNKRDAWRSDLKPTIDALE----DRD 245

Query: 227 LRSLTSKLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAV 286
             S  + L + ++    LQ +   ++ +RE++           GT    + Q  R    +
Sbjct: 246 EISALANLQWLIDKQQDLQFDISYASDERESDWNN-------YGTILTNNQQAERISSGL 298

Query: 287 SHQGDWQDVGQSDTYLQ-YEENTNKSREMSI---------DNTVFKSTLVAPIGEHMLSF 336
           +H G W      DT L+ Y EN   + + ++          N          +GEHML+ 
Sbjct: 299 THNGRWD---WGDTRLRYYYENVEVTDDSALIAQIGHITQTNHNLDGQTTVLLGEHMLTG 355

Query: 337 GVEGKHESLEDKTSNKISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKNYGSHF 396
           G E +   LE+  S  I     + ++Q A +++DE++L E   LT GGR+DH   YG+ F
Sbjct: 356 GAEYRWTKLEN--SRNILGDGTLDDSQSALYLQDEFSLGE-LSLTLGGRVDHHDVYGTEF 412

Query: 397 SPRVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDW--GQVSGGGNIYGNPDLKPETSIN 454
           SPR+Y V+ L   W +KGG    F+AP + +   D+      G  ++ GNPDL+PETS+N
Sbjct: 413 SPRLYLVYPLSSEWVIKGGGGKAFKAPNMSQSQADYIIPACRGACSVAGNPDLQPETSVN 472

Query: 455 KELSLMYSTGSGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRVNIDEAET 514
            ELS  Y T +    S+T FHND ++KI        I        GA  TY+ N++EA+ 
Sbjct: 473 YELSTQYQT-ADFGGSVTYFHNDVENKI--------ITETWDRTPGAVLTYQ-NVNEAKI 522

Query: 515 YGAEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQTTDRLNS 574
            G E      +T+S+ +S +Y+ T ++ K     G P    P+  +N  L WQ  + L++
Sbjct: 523 TGWELQAWYDLTDSLSISGNYSKTDAKDKQN---GAPFTLTPEDSYNLKLQWQALEGLST 579

Query: 575 WANLNYRGKEMQPEGGASNDDFIAPSYTFIDTGVTYALTDTATIKAAVYNLFDQEVNY-- 632
           +   +Y G++       S+       Y  +D GV Y +     +K  V NL D E +   
Sbjct: 580 FIAYHYTGEQYLRTNVKSD------GYGSLDLGVNYQINPMFRVKLGVTNLTDAERDQIA 633

Query: 633 AEYGYVEDGRRYWLGLDIAF 652
            +  Y++  R  + G+  +F
Sbjct: 634 TDLDYIQKSRSVYAGVTASF 653