Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score =  258 bits (660), Expect = 5e-73
 Identities = 200/659 (30%), Positives = 309/659 (46%), Gaps = 79/659 (11%)

Query: 1   MSRFNPSPVSLSVTLGLMFSASAFAQDATKTDETMVVTAAGYAQVIQNAPASISVISRED 60
           ++RF  + ++L+ +L  + SA A   D T+  E +VVTA+   Q + +APASISVI  E+
Sbjct: 14  LNRFPFALLALACSLQPLLSAQA---DDTEL-EHIVVTASAKDQQLSSAPASISVIDAEE 69

Query: 61  LESRYYRDVTDALKSVPGVTV-TGGGDTTDISIRGMGSNYTLILVDGKRQTSRQ---TRP 116
           ++    +D+ D L+   GV V +G      + +RGM   Y L+LV+GKR +S        
Sbjct: 70  IKLLPVKDLGDVLRGSVGVNVVSGNAGRNSLYVRGMDETYVLMLVNGKRVSSSNGLWRGG 129

Query: 117 NSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQLST 176
           N D   I      P+ AI R+E++RGPMS LYGSDA+GGVIN+IT+   + W   +    
Sbjct: 130 NFDITAI------PIDAISRVEIVRGPMSALYGSDAVGGVINVITKAPTEDWQLTLDAEY 183

Query: 177 VVQENRASGDEQSANFFVTGPLSDALSLQVYGQTTQRD----------EDEIEHGYGDKS 226
              +    GD Q  N F +G L+D+L L +  ++ ++D           D IE    ++ 
Sbjct: 184 SQMQEGDGGDRQRYNVFTSGKLTDSLGLMLTAESAEQDLWQLPEITPTFDTIE----ERK 239

Query: 227 LRSLTSKLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAV 286
            + L S L +QL  +  L         D +    K           S  + Q  RN   +
Sbjct: 240 TKKLYSALTWQLADNQTL---------DFDYQYDKDKVPLTTYAEKSKREQQIERNTFGL 290

Query: 287 SHQGDWQ------DVGQSDTYLQYEENTNKS------REMSIDNTVFKSTLVAPIGEHML 334
           +H+ DWQ      +    D+ L Y+ N+  S      R +   NT FK+T    + +   
Sbjct: 291 THKADWQWGQTQLEANLEDSKL-YDYNSRYSLQPPLGRHIDEKNTSFKATSFFSLWQQDF 349

Query: 335 SFGVEGKHESLEDKTSNKISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKNYGS 394
           + G E     +ED      +    +   Q++ F +DE    + + LT G R + ++ YG+
Sbjct: 350 TLGGEYHKTEVEDPVQYPTTKGDSVD--QYSLFAQDEIDFLDDWTLTLGARYEDNEKYGN 407

Query: 395 HFSPRVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDWGQVSGGG--NIYGNPDLKPETS 452
           + SPR Y V+      T KGGV T FRAP L E +P +  VS GG  ++ GNPDL PETS
Sbjct: 408 NLSPRAYIVYRATDKLTFKGGVGTAFRAPALFESSPTFASVSCGGACSVVGNPDLDPETS 467

Query: 453 INKELSLMYSTGSGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRVNIDEA 512
           +N E S++ S  +    S TA+HN  KD IT             + W      R   +E+
Sbjct: 468 VNYEFSVLMSDNT-WDISATAYHNKVKDLIT------------VSTWDRVSPSRTYYNES 514

Query: 513 ET--YGAEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQTTD 570
           E    G E T  + +TE + L  +Y+Y  +E+  G+     L   P    N  L W  TD
Sbjct: 515 EVTLQGIELTGRIDLTEDLSLKGNYSYLDTEKSDGS----ELNGRPDQTANLQLDWHMTD 570

Query: 571 RLNSWANLNYRGKEMQPEGGASNDDFIAPSYTFIDTGVTYALTDTATIKAAVYNLFDQE 629
               + + NY G  +       +       Y+  D G +Y LT+   ++A + N  +++
Sbjct: 571 DWQLYVSGNYFGDYL------DSSAIKRSGYSRFDFGTSYRLTENIKLRAGMTNFTNEQ 623