Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 5/294 (1%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           +  L+A+  F  + +  S +A A+ L+  + T+S+ L  LE +LG  L+ R   +L+LT 
Sbjct: 1   LDKLNAMAVFVRVVERGSFSAVARELQTSQPTISKILRALETELGGKLIARSTRQLSLTD 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            G+ +     Q+L   + ++ + Q     V G L +    +  R  ++  L +F++++  
Sbjct: 61  EGQRYYNECRQILVAVDSAEHSFQSGREAVAGPLRVGSSVSFGRLQIAARLPDFLERYPH 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           ++I L    Q+ D V E  D+ + I   +  G    ++G       ASP YLA   +P  
Sbjct: 121 VEIDLQLSDQNQDLVSEGLDVTLRIGELSDSGLIARQIGTTHRVTVASPNYLARHGQPHT 180

Query: 180 PRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLL 239
           P EL  H  + F         ++      Y++  ++   QS+N     + +  G GI L 
Sbjct: 181 PEELSQHNCLLFNLLSSQNQWIYEKNAQRYNV-RIKGNAQSNNSEAIREMVLGGLGIALS 239

Query: 240 PTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLG-RHPLRLRLFIDALRQA 292
           P W  +  E    G +I  +  +++Q   I+  +P   R   R++ F+D + +A
Sbjct: 240 PVWLFS--EDLKAGRVIAILQDYRAQSLPIHAVFPANRRQSARVKAFVDYMSEA 291