Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 8/300 (2%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L  ++AF  + Q  S TAAA  L+   + +SR ++ LE  L   LL R   R+ LT+
Sbjct: 18  MDTLQNMRAFSCVAQAGSFTAAAAVLDTTTANVSRAVSNLEAHLQTRLLNRTTRRIALTE 77

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AG+ + +  EQ+L    +++    + + +  G+L +   P + + ++   +  + + H  
Sbjct: 78  AGKRYLLRCEQILASVEEAEAEASDAHARPAGQLKMHSMPGVGQHYVIDAIARYRRNHPD 137

Query: 121 LKIRLLSQFQHSD---EVFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKP 177
           +   L    +  D   E ++  +++  E  A  G+  +RLG       ASP+Y+      
Sbjct: 138 VAFDLTMTHRVPDLLEEGYDVSIVLASE-LADSGFVSQRLGITYSIVCASPEYVKTFGMA 196

Query: 178 THPRELIHHPWIDFIA-CRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGI 236
             P +L++H  +  ++     +  L     G   +    S L  ++      AI+ G G+
Sbjct: 197 HKPADLLNHACLRLVSPVFPLDKWLFDGPEGQEMVTINSSPLLVNSADAMKTAISSGMGV 256

Query: 237 GLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALRQARPD 295
           G+LP + A   E    G+L+  ++ ++SQ   +   YP  ++   ++R +++ LR + P+
Sbjct: 257 GILPIYSA--IEGLRNGTLVRVLSDYRSQELNLYAIYPSRQYLDAKIRTWVEYLRGSLPE 314