Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 9/300 (3%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           L  +  F  + +  S +AAA+ L   KS +S ++A LE  LG  L+ R    L+LT+AG 
Sbjct: 5   LEPIAIFTHVARAGSFSAAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEAGH 64

Query: 64  VFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKI 123
           +  V  E+LL  A+++  ++  LN+   G L + +  +     +   L EFM +H  L++
Sbjct: 65  LLYVQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPEFMARHPELEL 124

Query: 124 RLLSQFQHSDEVFEP--DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPR 181
           + +S   H  +V     DL++ +    P+G     L   ++   ASP+Y+A   +P+ P 
Sbjct: 125 Q-VSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPEYIARHGEPSRPE 183

Query: 182 ELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLLPT 241
           +L+ H  + +                 Y    +    + DN      A   G G+  L +
Sbjct: 184 QLVDHNCLVYHGEWHEHSVWQFKRGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLAS 243

Query: 242 WFANGFETAHPGSLIPCVNGWQ-SQPTEINCFYPLGRH-PLRLRLFIDALRQ--ARPDEW 297
           +     +  + G+L+P +  WQ +    +   YP  +H   ++  FID ++     P  W
Sbjct: 244 YLME--DEINKGTLVPLLRDWQLTHHLPLQAVYPRRKHLAPKVSSFIDFIKNHIGTPPYW 301