Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 8/276 (2%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M DL+ +  F A+ + +  + AA+ +  PKST+SR++AQLEE+LG  LL R    L+LT+
Sbjct: 1   MPDLNGMALFAAVVRSQGFSQAARDIGMPKSTISRKVAQLEEELGVRLLQRDSRNLSLTQ 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            G +F  + E ++     ++  ++  +  V+G L + +  +  +  ++ +   F++ + +
Sbjct: 61  VGTLFYQHCETIVNELEAAKAVIEHTHADVSGSLRIAIPVSFSQELIANLCSGFLRLYPS 120

Query: 121 LKIRLLSQFQHSDEVFEP---DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKP 177
           +++ +  QF  SD        D+ I      P       L   +    ASP YL     P
Sbjct: 121 VELDV--QFTDSDVGLVGEGYDIAIKYGPLQPSDNVARLLFERQPILVASPGYLKKHGTP 178

Query: 178 THPRELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIG 237
             P+EL  H  I     R A +     + G  ++ +   +++ ++  M         GI 
Sbjct: 179 ATPKELGQHAGILLGTTRSAPI-WPLGKGGRKTMVSFNRKVRVNSAVMVRQLALDDFGIA 237

Query: 238 LLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFY 273
           +L    A   +    GSL+P +  W  +P ++   Y
Sbjct: 238 MLS--HAQCKKDLASGSLLPILPEWPMEPFKVYGVY 271