Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (253), Expect = 1e-26
 Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 11/294 (3%)

Query: 3   DLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAG 62
           DL+ V+ F A+ +H S TAAA AL   K+T+SR++A+LEE+ G  LL R    L LT+AG
Sbjct: 2   DLNRVQIFAAVVEHGSFTAAATALGITKATVSRKVAELEENAGVQLLFRTTRALKLTEAG 61

Query: 63  EVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLK 122
             +     ++L    +++  L      + G+L +V    L + +L  +L  F++Q+  ++
Sbjct: 62  SNYYHRVSRVLSELQQAETQLSASQQNIRGKLKIVCPIELGQLFLGSILARFLKQYPDIQ 121

Query: 123 IRLLSQFQHSDEVFEPDLIIWIEHAAPMGYRK--ERLGYWRYAAYASPKYLAHRDKPTHP 180
           I      +  D V E D+ +  + A P   R     +        ASP+YLA    P  P
Sbjct: 122 INTELTNRRVD-VIEEDIDMLFQIAEPKDPRLTCHAMVKADKMLLASPEYLAQFGTPKTP 180

Query: 181 RELIHHPWIDFIACRRAELELHHPEFGSYSLPALE--SRLQSDNLAMQADAIAKGRGIGL 238
            +L HH  I  ++   A ++     F        E  ++L  +N+ +  +A  +G GI  
Sbjct: 181 ADLAHHRAIRLVS---AHIDGVWKIFDGKQWQVYEPVAQLTVNNVTLAREAAIEGLGIAT 237

Query: 239 LPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALRQ 291
           +PT  A+  E    G L+P +  +     +I   YP   + P R R+FI  + Q
Sbjct: 238 VPTLIAS--EALASGKLVPVLEDYPMHQAKITLSYPQSAYLPRRYRVFIAFIYQ 289