Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., LysR family transcriptional regulator from Pseudomonas sp. BP01

 Score = 92.8 bits (229), Expect = 8e-24
 Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 6/292 (2%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M DL+ V +F A+    S T AA+ L Q K+ +S  + +LE +LG SLL R   R  LT 
Sbjct: 1   MLDLNRVASFVAVADSGSFTKAAQLLGQSKARISFNVRRLEAELGTSLLARNTRRTVLTD 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
            GE F V + QLL+   ++  ++Q+ +  + G L +       +  +  VL +  + H  
Sbjct: 61  CGERFLVEARQLLDQVERATASVQQSSAGLGGRLRITSTSAFAQRAVLPVLADMAEAHPD 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
           L I  ++     D V E  D+ I +   A   Y+  R+G +     ASP YL  R     
Sbjct: 121 LSIEHVASSHLCDLVAERFDVAIRLGELADSDYKAARIGDYALQLVASPAYLL-RHPAGS 179

Query: 180 PRELIHHPWIDFIACRRAELELHHPEFGSYSLPALE-SRLQSDNLAMQADAIAKGRGIGL 238
              L++  W+       A     + +  + S   +  SR Q+D+     D   +G G+ L
Sbjct: 180 TEALVNVHWLAHTHLSDAPWRFFNSQSMTESCQFVRPSRFQADSAEALLDMALRGLGVAL 239

Query: 239 LPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDAL 289
           LP+W  +  +    G L   ++        I+  Y    + P   R+FID L
Sbjct: 240 LPSWLVD--DAIAKGKLSAVLDPQHFARQPIHALYRNSMYVPAATRVFIDQL 289