Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 77/307 (25%), Positives = 135/307 (43%), Gaps = 23/307 (7%)

Query: 3   DLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAG 62
           DL+ ++ F  +    S T+AAKA+   K+T+SR++A+LE D G  LL R    L LT+AG
Sbjct: 2   DLNRIQMFAQVVDKGSFTSAAKAMGLTKATVSRKIAELETDTGVQLLYRTTRALKLTEAG 61

Query: 63  EVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLK 122
            ++    +++L     +++ L      + G L +V    L + +  ++   F++ H  + 
Sbjct: 62  SIYYNKIQRILMDLQSAEDQLSASQETIKGNLKIVCPIELGQLFFGRIFARFLEAHPEMT 121

Query: 123 IRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPR 181
           +      +  D + E  D++  +        +  R+     +  ASP YLA    P  P+
Sbjct: 122 LDAELTNRKVDMIEEGIDILFQVSDVRDSRLQSYRVLNTDKSLVASPDYLARHGTPATPQ 181

Query: 182 ELIHHPWIDFIACRRAELELHHPEFG-------SYSLPALESRLQSDNLAMQADAIAKGR 234
           +LI H        +   L+  H + G        +     E++L  +N+ +  +A  +G 
Sbjct: 182 DLIDH--------KAIRLKSTHIDGGWRLFDGQQWITIEPEAQLTVNNVTLAREAAIEGL 233

Query: 235 GIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFID----AL 289
           GI   PT  A        G LIP +  +    T I   +P   + P + R FI+    +L
Sbjct: 234 GIATAPTLVAQA--AIDEGHLIPLLTDFPMAQTAITLSFPRRAYLPRKYRAFIEYIYLSL 291

Query: 290 RQARPDE 296
              RP E
Sbjct: 292 FDRRPGE 298