Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 97.1 bits (240), Expect = 4e-25
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 7/289 (2%)

Query: 7   VKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGEVFA 66
           +  F ++ +  S + AA+ L   KS +S+R++ LE+ LG  L+ R   RL LT AG  + 
Sbjct: 7   IPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQYY 66

Query: 67  VYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLI-RGWLSQVLDEFMQQHSTLKIRL 125
            Y  Q   L  ++Q+AL      V G L + + PN+  +  ++ +L EF +Q+ T+ + +
Sbjct: 67  EYVHQAAALMQQAQDALASQQGAVQGSLKVSL-PNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 126 LSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPRELI 184
               +  D + E  D+++ I           +L        ASP YLAH+  P    +L 
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLR 185

Query: 185 HHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLLPTWFA 244
            H  + F +  R  LE      G  S       ++ +N  +    +  G GI L+P +  
Sbjct: 186 GHNCL-FYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLV 244

Query: 245 NGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALRQA 292
              E    G+L+P ++ +Q+    I    P  +H P RLR+FID L+QA
Sbjct: 245 E--EELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFLKQA 291