Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 79/291 (27%), Positives = 133/291 (45%), Gaps = 8/291 (2%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           +  +KAF A+ Q  S T AA  L      +S+ ++QLEE L   LL R   R+ +T+AG 
Sbjct: 6   IDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEAGR 65

Query: 64  VFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKI 123
            +    +Q+L    +   AL  L+   +G L +    +     L   L +F QQH  +++
Sbjct: 66  AYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAPMSFGIHHLPSALVQFQQQHPDVRL 125

Query: 124 RLLSQFQHSDEVFE-PDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPRE 182
            +    +  D + +  D+ + I          ++L   +    ASP+YLA R +P  P +
Sbjct: 126 DITLTDKKVDLLEDGVDVALRIGQLTSSSLIAKKLTPIKLVVCASPEYLAERGEPKTPAD 185

Query: 183 LIHHPWIDFIACRRAELELHHPEFGS-YSLPALESRLQSDNLAMQADAIAKGRGIGLLPT 241
           LIHH ++ F     ++L      FG  +S   + S L  +N  M  +A   GRGI + PT
Sbjct: 186 LIHHNYLHF---SYSDLGAAFGRFGEHFSALKIPSDLACNNGDMLVEAAIAGRGIVVQPT 242

Query: 242 WFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALRQ 291
           +  +  +    G L   +  +  +P  +   Y   +    ++R F+DAL Q
Sbjct: 243 FLVS--KALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQ 291