Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 9/300 (3%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           L  +  F  + +  S ++AA+ L   KS +S ++A LE  LG  L+ R    L+LT+AG+
Sbjct: 5   LEPIAIFTHVARAGSFSSAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEAGQ 64

Query: 64  VFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKI 123
           +     E+LL  A+++  ++  LN+   G L + +  +     +   L +FM +H  L++
Sbjct: 65  LLYAQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPDFMARHPELEL 124

Query: 124 RLLSQFQHSDEVFEP--DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTHPR 181
           + +S   H  +V     DL++ +    P+G     L   ++   ASP+Y+A    P  P 
Sbjct: 125 Q-VSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLAASPEYVAKHGYPERPE 183

Query: 182 ELIHHPWIDFIACRRAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLLPT 241
           +L+ H  + +             +   Y    +    + DN      A   G G+  L +
Sbjct: 184 QLVDHNCLVYHGEWHEHSVWQFKKGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLAS 243

Query: 242 WFANGFETAHPGSLIPCVNGWQ-SQPTEINCFYPLGRH-PLRLRLFIDALRQ--ARPDEW 297
           +          G+L+P +  WQ +    +   YP  +H   ++  FID ++     P  W
Sbjct: 244 YLLE--NEIEKGTLVPLLPEWQLTHHLPLQAVYPRRKHLAPKVSAFIDFIKDHIGSPPYW 301