Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 87/292 (29%), Positives = 130/292 (44%), Gaps = 13/292 (4%)

Query: 7   VKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGEVFA 66
           +  FH + +  SL  AA  L  PKSTLSRRL  LE++L   L  RQ   +TLT +G  F 
Sbjct: 6   IALFHRIVETGSLVEAADILNVPKSTLSRRLQTLEDELNVKLFHRQSRAMTLTASGSHFY 65

Query: 67  VYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKIRLL 126
             +  LL    ++   L      VTG L +++ P     +++Q + EFM  +  L + ++
Sbjct: 66  NKTTPLLATLEQTFSELSGKEAAVTGHLRILIFPIPELLYITQAIFEFMDLNPALTVEII 125

Query: 127 SQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYA-AYASPKYLAHRDKPTHPRELI 184
              +  D +    DL   +E A        R     +   +ASP+YL    KPT P EL 
Sbjct: 126 VSSEPKDMIRNNIDLAFMLEDAFNENEMVARHIISEFVHFFASPEYLERAGKPTKPEELP 185

Query: 185 HHPWIDFIACRRAELEL-HHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGIGLLPTWF 243
            H  I F   R     + +   FG   + ++   L  ++L+   +A   GRGI ++P   
Sbjct: 186 EHNSILF---RYPNGRIFNEVPFGKDRILSVTGNLCVNSLSTCLEAALMGRGIAMMPLPI 242

Query: 244 ANGFETAHPGSLIPCVNGWQSQPTEINCF--YPLGRH-PLRLRLFIDALRQA 292
           A   E    G L+        +P E  CF  YP  R   L  + FID + +A
Sbjct: 243 AR--EYVENGKLVMLFE--DIEPYEGKCFLVYPSRRFISLASQRFIDHVLRA 290