Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 15/280 (5%)

Query: 3   DLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAG 62
           D+  V AF  + +  SLT A       K+TLSR+L  LEE+LG +L  R+   ++ T+A 
Sbjct: 4   DMRLVMAFSLVMRSGSLTQAEAISGVSKATLSRQLQVLEEELGVTLFNRRARGMSPTEAA 63

Query: 63  EVFAVYSEQLL-ELANK---SQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQH 118
             F  + EQ+L +++ +   ++E LQEL + + GEL++         + + V   FM +H
Sbjct: 64  RAFHTHCEQILADVSGRLEVAREQLQELGSGIGGELSIKADSEFSTTFAAHVTKLFMARH 123

Query: 119 STLKIRL-LSQFQHSDEVFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKP 177
             +K+ L ++ +    +  E D  I  E         + LG      YASP YL  +  P
Sbjct: 124 PNVKLNLDVADYPGCAKAEEIDGYICAELPDIPDLVGKLLGQISCGLYASPAYLKQKGTP 183

Query: 178 THPRELIHHPWIDFIACR----RAELELHHPEFGSYSLPALESRLQSDNLAMQADAIAKG 233
             P +L  H   D I  R      +  + + + GS       +   +D+  M+   I  G
Sbjct: 184 VTPMDLTCH---DSIVIRSTSGNKDTLMLYSQGGSQPYLPKANVTTNDHWIMKTFCI-DG 239

Query: 234 RGIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFY 273
            GI LLP +F           L+P +  W+ QP  I C Y
Sbjct: 240 FGIALLPDFFVQ--PELSQQLLVPVLPEWKPQPRRIYCAY 277