Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 18/295 (6%)

Query: 4   LSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTKAGE 63
           L  ++ F A+ +  S   AA++L  P STLSRR+ QLE DL   LL R  +R+ LT  GE
Sbjct: 7   LDDLRCFCAVARSGSFKEAAQSLGMPLSTLSRRIRQLETDLQLRLLNRDAHRVILTSIGE 66

Query: 64  VFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHSTLKI 123
            +   S  L +  N   E L     Q  G++ +    N    +L  +  +F+ Q+  +++
Sbjct: 67  QYFERSVALFDELNNIDEDLHRDKYQPQGKIRISAPINSGTHFLRSIFYDFLLQYPDIQL 126

Query: 124 RL-LSQFQHSDEVFEPDLIIWIEHAAPMGYRKERLGYWRYAAYASPKY----LAHRDKPT 178
            L  S      E    D+   + +     +    L +  +   + P Y    +   DK  
Sbjct: 127 DLSFSNSLIDIEAEGMDVAFRVGNPVVENWIARPLKHIHFILCSHPDYDISSITTPDKLC 186

Query: 179 HPRELIHHPWIDFIACRRAELEL--HHPEFGSYSLPALESRLQSDNLAMQADAIAKGRGI 236
               +I HP I +    +   E   +HP  G         RL+ D L +   AI  G GI
Sbjct: 187 GHPTIICHPMIPWQLVHKTTGEEFDYHPNKG--------VRLEVDELMLLTHAIKTGIGI 238

Query: 237 GLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRLFIDALR 290
           G +P +FA        G +   +  W S+   ++  Y    H P+R+RLFI+ ++
Sbjct: 239 GYVPDYFA--LPMIAQGEVNHVLPEWSSKARTLSMLYRDRDHLPMRVRLFIEFVK 291