Pairwise Alignments

Query, 298 a.a., iron-regulated virulence regulatory protein IrgB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 83/307 (27%), Positives = 129/307 (42%), Gaps = 22/307 (7%)

Query: 1   MQDLSAVKAFHALCQHKSLTAAAKALEQPKSTLSRRLAQLEEDLGQSLLMRQGNRLTLTK 60
           M  L A K F  + +  S+  AA+AL+  +S ++R LA++EE  G  LL R   RL+LT 
Sbjct: 1   MDRLEAAKVFVTIVERGSMIGAAEALDMSRSMVTRYLAEMEEWSGARLLHRSTRRLSLTD 60

Query: 61  AGEVFAVYSEQLLELANKSQEALQELNNQVTGELTLVVHPNLIRGWLSQVLDEFMQQHST 120
           AGE    Y ++LLELA +        + Q  G L +     +    L  V+  ++ Q+  
Sbjct: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLLLPSVVRPYLAQYPQ 120

Query: 121 LKIRLLSQFQHSDEVFEP-DLIIWIEHAAPMGYRKERLGYWRYAAYASPKYLAHRDKPTH 179
             +      Q  D V E  DL I I +         RLG       A+P YLA     TH
Sbjct: 121 ASVNFHVTSQTVDLVAERIDLAIRITNELDPTLIARRLGECESVVCAAPSYLASHSAITH 180

Query: 180 PRELIHHPWIDF--------------IACRRAELELHHPEFGSYSLPALESRLQSDNLAM 225
           P +L  H  + +              IA +    +    E G      ++  L +++  +
Sbjct: 181 PEDLTRHNCLTYSYFGDVMWRFTQTPIAVKATPTQ----EVGQIFNIPVKGNLSANDSMV 236

Query: 226 QADAIAKGRGIGLLPTWFANGFETAHPGSLIPCVNGWQSQPTEINCFYPLGRH-PLRLRL 284
             +A   G GI + P W A        G+L+P +  ++ Q   +   Y   +H    LR+
Sbjct: 237 VLNATLAGEGIAMQPLWAAK--PHLDSGALVPLLREFKPQSLGVYGVYQSRKHMQPALRV 294

Query: 285 FIDALRQ 291
            +D L Q
Sbjct: 295 MMDMLVQ 301