Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2C3

 Score =  214 bits (544), Expect = 2e-60
 Identities = 116/241 (48%), Positives = 159/241 (65%), Gaps = 3/241 (1%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MR+ R +   P+  LG   L E  A +IGRVLRM  G  V +FDG G EF   ++EVGKK
Sbjct: 1   MRLSRFFIDAPL-SLGDHELPEAQAHYIGRVLRMAEGDAVQVFDGSGQEFRGTLAEVGKK 59

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
           +V V + E+    +ESPL +HLGQ +SRG++M++ IQK+ ELGV+ ITP+ SERC V+L 
Sbjct: 60  RVRVQLDEQFAGQLESPLRIHLGQGLSRGERMDWAIQKATELGVSEITPIFSERCEVRLK 119

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
           ++R +K++  W+++AISACEQCGR+TVP I P + L  W  +    LKL LHP A+  L 
Sbjct: 120 DERADKRLLHWRQVAISACEQCGRSTVPVIHPPLLLADWLKQAEAELKLVLHPVAE-PLV 178

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
           +   P S +  LIGPEGGLS  E++  +   ++   LGPRVLRTETA + A+A  Q  +G
Sbjct: 179 SHEKP-STLAFLIGPEGGLSDAEVEQAKTAGYQAARLGPRVLRTETAPVVALAVAQQLWG 237

Query: 241 D 241
           D
Sbjct: 238 D 238