Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., 16S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

 Score =  215 bits (547), Expect = 7e-61
 Identities = 116/241 (48%), Positives = 156/241 (64%), Gaps = 3/241 (1%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MR+ R +   P+  LG   L E  A +I RVLRM  G  + +FDG G EF   ++EVGKK
Sbjct: 1   MRLSRFFIDAPL-SLGEHELPEAQAHYISRVLRMAEGDALQVFDGSGQEFRGTLAEVGKK 59

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
           +V V +TE     IESPL +HLGQ +SRG++M++ IQK+ ELGVT ITP+ S+RC V+L 
Sbjct: 60  RVRVALTESFAGQIESPLQIHLGQGLSRGERMDWAIQKATELGVTEITPIFSDRCEVRLK 119

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
           ++R +K++Q W+++AISACEQCGR+ VP I P + L  W  +    LKL LHP A+  ++
Sbjct: 120 DERADKRLQHWRQVAISACEQCGRSRVPVIHPPLLLADWLKQSEAELKLVLHPVAEPLVS 179

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
                 S +  LIGPEGGLS  E+D  +   F    LGPRVLRTETA + A+A  Q  +G
Sbjct: 180 --HAKPSTLAFLIGPEGGLSDVEVDQAQSAGFHSARLGPRVLRTETAPVVALAVAQQLWG 237

Query: 241 D 241
           D
Sbjct: 238 D 238