Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., 16S rRNA m(3)U-1498 methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  205 bits (521), Expect = 8e-58
 Identities = 116/241 (48%), Positives = 151/241 (62%), Gaps = 3/241 (1%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MR+ R +   P+  LG   L E  A +I RVLRM  G  + LFDG G EF   + EVGKK
Sbjct: 1   MRLSRFFTETPL-SLGEHELPEAQAHYISRVLRMTEGDALQLFDGSGQEFRGTLLEVGKK 59

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
           +V V +TE     +ES L +HLGQ +SRG++M++ IQK+ ELGV+ ITP++SERC V+L 
Sbjct: 60  RVHVQLTESFAGQVESGLRIHLGQGLSRGERMDWAIQKATELGVSEITPIVSERCEVRLK 119

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
           ++R EK+   WQ+IAISACEQCGR+ VP I   M L  W       LKL LHP A+  L 
Sbjct: 120 DERAEKRQAHWQQIAISACEQCGRSVVPVIHAPMPLAEWIKHTEADLKLVLHPVAE-PLT 178

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
           +   P S +  LIGPEGGL+  E+   +   F    LGPRVLRTETA + A++  Q  +G
Sbjct: 179 SHDKPAS-LAFLIGPEGGLNDAEVTQAQDAGFHAARLGPRVLRTETAPVVALSVAQQLWG 237

Query: 241 D 241
           D
Sbjct: 238 D 238