Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., 16S ribosomal RNA methyltransferase RsmE (RefSeq) from Shewanella amazonensis SB2B

 Score =  310 bits (793), Expect = 2e-89
 Identities = 156/243 (64%), Positives = 183/243 (75%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MRIPRI+ P  +      AL ED   H+GRVLRM  G+++ +F+G G ++ A I   GKK
Sbjct: 1   MRIPRIFQPLDLSPSAEFALDEDGFAHVGRVLRMGEGEQIRVFNGDGKDYLADIVSAGKK 60

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
            + V +    +N  ESPL LHLGQVISRGD+M+FT+QKSVELGV TITPL SERCGVKL 
Sbjct: 61  SLTVKVVAVEDNQSESPLHLHLGQVISRGDRMDFTLQKSVELGVNTITPLFSERCGVKLS 120

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
            +R +KKI QWQKI ISACEQCGR TVP +RP+MDL  WCAE T ALKLNLHPRA + +N
Sbjct: 121 GERLDKKIAQWQKIVISACEQCGRATVPVVRPVMDLAEWCAEQTSALKLNLHPRADHGIN 180

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
            L     +VRLLIGPEGGLSAEEI MT  ++F E LLGPRVLRTETAALTAI ALQ++FG
Sbjct: 181 GLVLDNPRVRLLIGPEGGLSAEEIAMTETHKFTEVLLGPRVLRTETAALTAITALQMKFG 240

Query: 241 DLG 243
           DLG
Sbjct: 241 DLG 243