Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Rahnella sp. WP5

 Score =  350 bits (899), Expect = e-101
 Identities = 177/243 (72%), Positives = 198/243 (81%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MRIPRIYHPE +     +ALSEDAA H+GRVLRMQ GQ + LFDG    F A I++V KK
Sbjct: 1   MRIPRIYHPENLTAHSEIALSEDAANHVGRVLRMQPGQAIQLFDGSNQVFEASITQVDKK 60

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
            V V++ + V    ESPL+LHLGQVISRG+KMEFTIQKS+ELGV TITPL SERCGVKLD
Sbjct: 61  SVRVSLNQGVLADNESPLNLHLGQVISRGEKMEFTIQKSIELGVNTITPLFSERCGVKLD 120

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
            +R EKK+QQWQKIAI+ACEQCGRN +PEIRP M LEAWCAE  ++LKLNLHPRA +S+N
Sbjct: 121 GERLEKKLQQWQKIAIAACEQCGRNRIPEIRPAMQLEAWCAEQDDSLKLNLHPRASHSIN 180

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
           TLP PVS VRLLIGPEGGLSAEEI MT  Y F + LLGPRVLRTET ALTAI ALQVRFG
Sbjct: 181 TLPLPVSHVRLLIGPEGGLSAEEIAMTSGYGFTDILLGPRVLRTETTALTAITALQVRFG 240

Query: 241 DLG 243
           DLG
Sbjct: 241 DLG 243