Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Parabacteroides merdae CL09T00C40

 Score =  109 bits (272), Expect = 5e-29
 Identities = 80/221 (36%), Positives = 110/221 (49%), Gaps = 9/221 (4%)

Query: 20  LSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKKQVLVNITERVENSIESPLD 79
           L E+ AGH  RVLR+  G E+LL DG G  F A IS    K   VNI E+ E       +
Sbjct: 15  LPEEEAGHCIRVLRLTEGDEILLTDGKGFFFKAAISRAHPKHCEVNILEQWEQPALWNFN 74

Query: 80  LHLGQVISRG-DKMEFTIQKSVELGVTTITPLLSERCGVKLDEKRFEKKIQQWQKIAISA 138
           LH+    ++  D+ME+  +K+ E+G+  IT L       +  E++ E K  + +KI ISA
Sbjct: 75  LHIAVAPTKNMDRMEWFAEKATEIGINAITCL-----NCRFSERK-EIKPARLEKILISA 128

Query: 139 CEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLH--PRAKYSLNTLPTPVSKVRLLIGPE 196
            +Q  + T+PE+  + D   + + P    K   H     K  L     P     +LIGPE
Sbjct: 129 MKQSQKATLPELNGMTDFRTFVSLPFAGRKFIAHCEEGVKPLLKQTYHPGENALVLIGPE 188

Query: 197 GGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQV 237
           G  S EEI +  +  FE   LG   LRTETAAL A   + V
Sbjct: 189 GDFSPEEIALALKCGFEPISLGESRLRTETAALVACHTIHV 229