Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., RNA methyltransferase-like protein from Phaeobacter inhibens DSM 17395

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 72/244 (29%), Positives = 116/244 (47%), Gaps = 12/244 (4%)

Query: 5   RIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKKQVLV 64
           R+Y   P+    +V L  D A ++  V+R   G ++LLF+G   E+ A ++E  K+  ++
Sbjct: 6   RLYVEHPLGAGQSVPLDRDQAHYLFGVMRQTVGAQLLLFNGEDGEWRAEVAEASKRSGVL 65

Query: 65  NITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLDEKRF 124
            I +     +  P DL L     +  + +F ++K+ E+G   I P+ +E      D  R 
Sbjct: 66  -ICQEQTRPLVLPPDLWLLFAPIKKARTDFIVEKAAEMGAARILPVQTE--FTNSDRIRQ 122

Query: 125 EKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAK----YSLN 180
           ++     Q  A+ A EQCG   VPE+  +  L        E  +L     A+     +L 
Sbjct: 123 DR----LQAHAVEAAEQCGGTYVPEVADLQKLSRLLDHWPEERQLMFCDEAEVGSALALA 178

Query: 181 TLPTPVSKVRLLIGPEGGLS-AEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRF 239
           +     +   ++IGPEGG S AE   +    Q     LGPR+LR +TAA+ A+   Q R+
Sbjct: 179 SETAAQAPWAIVIGPEGGFSEAERKRLHALPQSHVVSLGPRILRADTAAVAALTVWQQRY 238

Query: 240 GDLG 243
           GD G
Sbjct: 239 GDWG 242