Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., ribosomal RNA small subunit methyltransferase E from Marinobacter adhaerens HP15

 Score =  234 bits (596), Expect = 2e-66
 Identities = 122/244 (50%), Positives = 165/244 (67%), Gaps = 2/244 (0%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MRIPRIY    + Q  T  L ++AA H+GRVLRMQAGQE+LLF+G G ++PA IS   KK
Sbjct: 1   MRIPRIYTNSALAQGSTAELDDNAAQHVGRVLRMQAGQELLLFNGDGNDYPATISSASKK 60

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
            V V +     N+ ESPL++ LGQ +S+GD+M++ +QK+VE+GVT I PL +ERC VKL 
Sbjct: 61  NVEVQVGTPEANTTESPLEIVLGQTLSKGDRMDYAVQKAVEMGVTRIVPLTTERCDVKLK 120

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEA-LKLNLHPRAKYSL 179
             R +K+++ WQ +AISA EQCGR  VPEI P+M +  W     +  ++L LH R +++L
Sbjct: 121 GDREDKRLRHWQSVAISAAEQCGRARVPEILPVMTVSEWLEHSRDCEVRLVLHHRTEHAL 180

Query: 180 NTLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRF 239
            ++  P  +V L+IGPEGGLS EEI    +  F    LGPRVLRTETA + A+A  Q  +
Sbjct: 181 KSI-IPPERVALMIGPEGGLSPEEIAHAEKEGFLPVALGPRVLRTETAPVAAMALCQWLW 239

Query: 240 GDLG 243
           GD+G
Sbjct: 240 GDIG 243