Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Ralstonia sp. UNC404CL21Col

 Score =  163 bits (412), Expect = 3e-45
 Identities = 95/249 (38%), Positives = 138/249 (55%), Gaps = 9/249 (3%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           M +PR +   P+    TV L E    HI  VLR+ AG +V LFDG G EF A +  + K+
Sbjct: 1   MGLPRFFVDTPLAPNTTVTLPEAVTRHI-HVLRLAAGDDVCLFDGSGHEFRARLDAINKR 59

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
               ++ +  +   E+   + L Q I+ GDKM++ I+K+VELG+  + PL +ER  V+L 
Sbjct: 60  DATASLADATQPDTEARYAITLAQGIAGGDKMDWLIEKAVELGINAVAPLQTERGVVRLS 119

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAW--CAEPTEALKLNLHPRAKYS 178
            +R  K++Q WQ +  +ACEQCGR  VP + P+  L  W   A+ T+  ++ L PR   S
Sbjct: 120 GERAAKRVQHWQALVQAACEQCGRARVPVVAPVATLREWLAAAKSTDTPRVLLSPRGTQS 179

Query: 179 LNTLPTPV------SKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAI 232
           L             + + LLIGPEGGLS +E  +     F    LG R+LRTE+AAL A+
Sbjct: 180 LTQWAVQSRTHIEGNGIVLLIGPEGGLSPDEEALAEAAGFLPLTLGRRILRTESAALVAV 239

Query: 233 AALQVRFGD 241
           +AL    G+
Sbjct: 240 SALHAVLGE 248