Pairwise Alignments

Query, 243 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., 16S ribosomal RNA methyltransferase RsmE (RefSeq) from Shewanella sp. ANA-3

 Score =  318 bits (815), Expect = 6e-92
 Identities = 160/243 (65%), Positives = 189/243 (77%)

Query: 1   MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGLGAEFPAVISEVGKK 60
           MR+PRIY P+P+     + L ED A HIG+VLRM +G+ + LF+G G ++ A I + GKK
Sbjct: 1   MRVPRIYQPQPLAVNQQLNLDEDGAAHIGKVLRMGSGEHISLFNGDGNDYLAEIVDAGKK 60

Query: 61  QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD 120
            V V +     N  ESPL+LHLGQVISRGD+MEFTIQKSVELGV TITPL S+RCGVKL 
Sbjct: 61  SVTVKVLSCEANPSESPLNLHLGQVISRGDRMEFTIQKSVELGVNTITPLFSDRCGVKLT 120

Query: 121 EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSLN 180
            +R EKKIQQWQKI ISACEQ GR+ VP +RP M+L+ WC+EPT ALKLNLHPRA + +N
Sbjct: 121 GERLEKKIQQWQKIVISACEQSGRSQVPIVRPAMELQQWCSEPTSALKLNLHPRAAHGIN 180

Query: 181 TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAIAALQVRFG 240
            L    ++VRLLIGPEGGLSAEEI MT  YQF + LLGPRVLRTETA+LTAI ALQ+RFG
Sbjct: 181 GLDLSHTRVRLLIGPEGGLSAEEIAMTETYQFTDVLLGPRVLRTETASLTAITALQLRFG 240

Query: 241 DLG 243
           DLG
Sbjct: 241 DLG 243