Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 94/282 (33%), Positives = 148/282 (52%), Gaps = 30/282 (10%)

Query: 3   LNQYLDGMLTHKASDLYITV---GAPILYRVDGELR---AQGEALSVADVTAL-LHAMMD 55
           +N  L      +ASD++I      + + YRVDG LR   +  +AL  A V+ + + A +D
Sbjct: 109 INALLTQAARDEASDIHIEPYESHSVVRYRVDGTLRDVVSPRKALHGALVSRIKIMAQLD 168

Query: 56  DARQAEFKQTREANFAVVRDSGR---FRVSAFFQRELPGAVIRRIETRIPTFEELKL--- 109
            A     K+  +     +R +GR    RVS          V+R ++ +    +   L   
Sbjct: 169 IAE----KRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQAGRLQLETLGMD 224

Query: 110 PEVL---QNLAIAKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEH 166
           P+VL    +L     G+VLV G TGSGK+T++ A    R      +ILTVEDP+E+    
Sbjct: 225 PDVLGKLDHLIRQPHGIVLVTGPTGSGKTTSLYASLA-RLDASVHNILTVEDPVEYDLPG 283

Query: 167 KRCIVTQREVGLDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATL 226
              I    ++ +   ++ +AL+  LRQ PD+I+IGEIR  ET + A+  + TGHL +ATL
Sbjct: 284 ISQIQVNAKIDM---TFALALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATL 340

Query: 227 HANNANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLR 268
           H N+A  A+ R++ +      E FL  L+ ++ GV+AQ+L+R
Sbjct: 341 HTNDAVSAINRLIDM----GVEPFL--LASSMLGVLAQRLVR 376