Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Twitching motility protein PilT from Pseudomonas fluorescens FW300-N2E2

 Score =  247 bits (630), Expect = 4e-70
 Identities = 137/339 (40%), Positives = 211/339 (62%), Gaps = 3/339 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M++ + L       ASDL+++ G P + RVDG++R     AL    V  L++ +M+D ++
Sbjct: 1   MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPALDHKQVHELIYDIMNDRQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            ++++  E +F+  V    RFRV+AF Q    GAV R I +++ T E+L + EV + +  
Sbjct: 61  VDYEKFLETDFSFDVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEVFRKVTE 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
           A RGLVLV G TGSGKSTT+AAM  Y N H+  HILT+EDPIEFVHE ++C++ QREV  
Sbjct: 121 APRGLVLVTGPTGSGKSTTLAAMIDYLNSHKHHHILTIEDPIEFVHEPRKCLINQREVHR 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT+ +  AL+++LR+ PD+IL+GE+R  ET+  A+T AETGHL   TLH  +A + ++R+
Sbjct: 181 DTQGFSTALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P +++      LS +L+ VI+Q L++ K G GR    E++L +  I +LIR  ++ 
Sbjct: 241 VDVFPGDEKSMVRSMLSESLQAVISQTLVK-KIGGGRIAAHEIMLGTSAIRNLIREDKVA 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSA 337
           ++ + +     +GMQT D  L  LV    IS + A   A
Sbjct: 300 QMYSAIQTGGSLGMQTLDMCLKDLVSKGLISREHARERA 338