Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 100/360 (27%), Positives = 167/360 (46%), Gaps = 71/360 (19%)

Query: 3   LNQYLDGMLTHKASDLYITVGAPIL---YRVDGEL----RAQGEALSVADVTALLHAMMD 55
           +N  L   +  +ASD+++      L    R+DG+L    R + E  ++      + A +D
Sbjct: 108 INALLSEAVREQASDVHLETFEQYLSVRMRIDGQLQEMLRPRRELANLLVSRIKVMARLD 167

Query: 56  DARQAEFKQTREANFAVVRDSGR---FRVSAFFQRELPGAVIRRIETRIPTFE--ELKLP 110
            A +   +  R A    +R +G     RVS          V+R ++ +    +   L LP
Sbjct: 168 IAEKRVPQDGRMA----LRLAGHEVDVRVSTLPSAHGERVVLRLLDKQAGRLDLHRLGLP 223

Query: 111 EV----LQNLAIAKRGLVLVVGATGSGKSTTM-AAMTGYRNQHRTGHILTVEDPIEFVHE 165
           +     L+ L     G+VLV G TGSGK+T++ AA++   +Q R  +ILTVEDPIE+   
Sbjct: 224 DDTLADLRLLLGKPHGIVLVTGPTGSGKTTSLYAALSSINDQSR--NILTVEDPIEYHLP 281

Query: 166 HKRCIVTQREVGLDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMAT 225
               +    +V +   ++   L+  LRQ PD++++GEIR RET E A+  + TGHL ++T
Sbjct: 282 GIGQMPVNPKVDM---TFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLST 338

Query: 226 LHANNANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLR----------------- 268
           LH N A  A+ R++ +      + +L  L+ +L G++AQ+LLR                 
Sbjct: 339 LHTNTAVGAVTRLVDM----GVDAYL--LASSLAGIVAQRLLRALCPSCKTPYVADAATC 392

Query: 269 ----------------------DKNGKGRHGVFEVLLNSPRIADLIRRGELHELKATMAR 306
                                  K  +GR G++E++     ++ LI +G   +  A  AR
Sbjct: 393 RRLGLDAGAAPRLFKAQGCEQCQKGYRGRFGIYELVNVGAALSQLIHQGATEQALAAEAR 452