Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., twitching motility protein PilT from Pseudomonas fluorescens FW300-N2C3

 Score =  362 bits (929), Expect = e-105
 Identities = 186/350 (53%), Positives = 258/350 (73%), Gaps = 3/350 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           ME++  L  + +   SDLY++ GAP   R +G L+  G EA  V D+  L  ++MD  ++
Sbjct: 1   MEIDPLLRILASQNGSDLYMSTGAPPCARFEGVLKPLGNEAFKVGDIARLAESLMDAEQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            EF +  E N A+ +   GRFRV+ F QR     VIR ++  IP FE+LKLP VL +  +
Sbjct: 61  LEFDRELEMNLAISLAGVGRFRVNVFKQRNDVSMVIRNVKLDIPRFEDLKLPRVLLDSIM 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
            K+GL+L VGATGSGKST++AA+  YRN++ +GHI+T+EDP+E++H HK+ I+ QREVG+
Sbjct: 121 QKQGLMLFVGATGSGKSTSLAALIDYRNRNSSGHIITIEDPVEYIHRHKKSIINQREVGV 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT S+  ALKN+LRQAPD++LIGEIR RETME+A++FA+TGHL ++TLHA+NANQAL+R+
Sbjct: 181 DTRSFHAALKNTLRQAPDVVLIGEIRDRETMEHALSFADTGHLVISTLHAHNANQALDRV 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           ++  P+E+R Q L DL  NLK  ++Q+L+R + G+ R  V EV+L SP +ADLIRR EL 
Sbjct: 241 INFFPEERRPQLLNDLGNNLKAFVSQRLVRTRTGQRRAAV-EVMLGSPTVADLIRRNELG 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLK 348
           ELK  M +S+E+GMQTFDQAL+ LVV+  I E++AL +ADSAN+LRL LK
Sbjct: 300 ELKGIMEKSEELGMQTFDQALFNLVVEGAIDEEEALKNADSANNLRLRLK 349