Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., twitching motility protein PilT from Pseudomonas fluorescens FW300-N2E3

 Score =  258 bits (658), Expect = 2e-73
 Identities = 142/344 (41%), Positives = 216/344 (62%), Gaps = 3/344 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M++ + L       ASDL+++ G P + RVDG++R     AL    V  L++A+M+D ++
Sbjct: 1   MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPALDDKQVRELIYAIMNDKQR 60

Query: 60  AEFKQTREANFAVVRDS-GRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            EF+Q  E +F+       RFRV+AF Q   PGAV R I ++I + E+L +  V + +A 
Sbjct: 61  VEFEQALETDFSFEAPGVARFRVNAFNQYRGPGAVFRTIPSKIQSMEDLGMGNVFRRIAE 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGLVLV G TGSGKSTT AAM  Y N HR  HILT+EDPIEF+HE ++C++ QREV  
Sbjct: 121 VSRGLVLVTGPTGSGKSTTQAAMIDYLNNHRHHHILTIEDPIEFLHESRKCLINQREVHR 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT S+  AL+++LR+ PD+IL+GE+R  ET+  A+T AETGHL   TLH N+A + ++R+
Sbjct: 181 DTRSFATALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTNSAAKTIDRV 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P +++      LS +L+ VI+Q L++ K G GR    E++L +  I +LIR  ++ 
Sbjct: 241 VDVFPGDEKSMVRSMLSESLQAVISQSLIK-KIGGGRVAAHEIMLGTSAIRNLIREDKIA 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSAND 342
           ++ +++     +GMQT D +L  LV    I+ + A   A S ++
Sbjct: 300 QMYSSIQTGGSLGMQTLDMSLKDLVNKGLITREHARERARSPDN 343