Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Twitching motility protein PilT from Pseudomonas fluorescens FW300-N1B4

 Score =  251 bits (640), Expect = 3e-71
 Identities = 138/344 (40%), Positives = 216/344 (62%), Gaps = 3/344 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M++ + L       ASDL+++ G P + RVDG++R     AL   +V  L++ +M+D ++
Sbjct: 1   MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPALDHKEVHELIYDIMNDLQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            +F++  E +F+  V    RFRV+AF Q    GAV R I +++ + ++L + EV + +  
Sbjct: 61  VDFEKHLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLSMDDLGMGEVFRKITE 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
           A RGLVLV G TGSGKSTT+AAM  Y N HR  HILT+EDPIEFVHE ++C++ QREV  
Sbjct: 121 APRGLVLVTGPTGSGKSTTLAAMIDYLNNHRHHHILTIEDPIEFVHESRKCLINQREVHR 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT S+  AL+++LR+ PD+IL+GE+R  ET+  A+T AETGHL   TLH  +A + ++R+
Sbjct: 181 DTRSFATALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P +++      LS +L  V++Q L++ K G GR    E++L +  I +LIR  ++ 
Sbjct: 241 VDVFPGDEKSMVRSMLSESLLAVVSQTLIK-KIGGGRIAAHEIMLGTSAIRNLIREDKVA 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSAND 342
           ++ +++     +GMQT D  L +LV    IS + A   A S ++
Sbjct: 300 QMYSSIQTGGSLGMQTLDMCLKELVTKGVISREHAREKARSPDN 343