Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Type II secretion system protein-like protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  345 bits (885), Expect = 1e-99
 Identities = 177/360 (49%), Positives = 258/360 (71%), Gaps = 6/360 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEA-LSVADVTALLHAMMDDARQ 59
           M++  +L  M    ASD+++T GAP+  +++G+L   G   L    V  + +++MD+ + 
Sbjct: 1   MDIGYFLKLMTEKNASDMFLTTGAPVYIKIEGKLYPLGNTGLPPGMVKKIAYSLMDEGQV 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            +F++  E N A+ + D+GRFRV+ F QR   G VIR I +RIP+ EEL LP+VL+++ +
Sbjct: 61  PQFERELELNMAIALSDAGRFRVNVFKQRGEVGMVIRAIRSRIPSIEELNLPQVLKDVIM 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGLVLVVG+TGSGKST++A+M  +RN   TGHILT+EDPIE++H+HK  IV QREVGL
Sbjct: 121 TPRGLVLVVGSTGSGKSTSLASMIDHRNSTTTGHILTIEDPIEYLHKHKMSIVNQREVGL 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT +++ ALKN++R+APD+ILIGEI   ETME A+ FAETGHLC+ATLH+NNA+Q +ERI
Sbjct: 181 DTHAFQSALKNAMREAPDVILIGEILDAETMEAAIAFAETGHLCLATLHSNNADQTIERI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           L+  P+   +  L++L+LNL+ V++Q+L++  +G+ R    EVLLN+P I DL+RRG++H
Sbjct: 241 LNFFPESAHKNVLMNLALNLRAVVSQRLVKGLDGR-RRPATEVLLNTPMIRDLLRRGQVH 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRGDDYGSG 358
           E+K  M  S E GMQTFDQ L+++V   +I +++AL +ADS + L L  +   G   GSG
Sbjct: 300 EVKQAMEESLEEGMQTFDQCLFRMVKTGEIEQEEALRAADSRDGLALKFRLSEG---GSG 356