Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Pilus retraction protein PilT from Pseudomonas syringae pv. syringae B728a

 Score =  348 bits (892), Expect = e-100
 Identities = 185/362 (51%), Positives = 254/362 (70%), Gaps = 5/362 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M+    L  + +   SDLY++ GAP   + +G L+  G E     +V  +   +MD+ ++
Sbjct: 1   MDFPALLKILASQDGSDLYLSTGAPPCAKFNGVLKPLGSETFKPGEVAVIAQGLMDEEQK 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            EF++  E N AV +   GRFR++ F QR     V R I+  IP FE+L LP VL ++ +
Sbjct: 61  LEFQRELEMNLAVSMAGIGRFRINIFMQRNEVSIVARNIKLDIPRFEDLFLPPVLLDVIM 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
            KRGLVL VGATGSGKST++AA+  YRN++ +GHI+T+EDP+EF+H HK+ IV QREVG+
Sbjct: 121 EKRGLVLFVGATGSGKSTSLAALIDYRNRNASGHIITIEDPVEFIHRHKKSIVNQREVGV 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT S+  ALKN+LRQAPD+ILIGEIR RETME+A+ FA+TGHL ++TLHANNANQAL+RI
Sbjct: 181 DTRSFHAALKNTLRQAPDVILIGEIRDRETMEHALAFADTGHLAISTLHANNANQALDRI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           ++  P+E+R Q L DL  NLK  ++Q+L+R  +GK R  V EV++ +P I DLI+R EL 
Sbjct: 241 INFFPEERRAQLLHDLGNNLKAFVSQRLVRTPDGKRRAAV-EVMMGTPTIRDLIQRNELT 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRGDDYGSG 358
           ELK  M +S  +GMQTFD AL+ L V+  ISE++AL +ADS N++RL LK     + G+G
Sbjct: 300 ELKGIMEKSGSLGMQTFDSALFNLAVEGAISEEEALKNADSQNNVRLRLKLH--SEGGAG 357

Query: 359 SL 360
           SL
Sbjct: 358 SL 359