Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., pilus retraction ATPase PilT from Pseudomonas syringae pv. syringae B728a

 Score =  246 bits (627), Expect = 9e-70
 Identities = 136/339 (40%), Positives = 210/339 (61%), Gaps = 3/339 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59
           M++ + L       ASDL+++ G P + RVDG++R      L   +V AL++ +M+D ++
Sbjct: 1   MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLDAKEVKALIYDIMNDKQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            +F++  E +F+  V    RFRV+AF Q    GAV R I ++I + E+L +  V + +  
Sbjct: 61  QDFEERLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKILSMEDLGMGNVFRKITD 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGL+LV G TGSGKSTT+AAM  Y N ++  HILT+EDPIEFVHE K+C+V QREV  
Sbjct: 121 VARGLILVTGPTGSGKSTTLAAMIDYLNNNKHHHILTIEDPIEFVHESKKCLVNQREVHR 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT  +  AL+++LR+ PD+IL+GE+R  ET+  A+T AETGHL   TLH  +A + ++RI
Sbjct: 181 DTLGFSEALRSALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           + + P +++      LS +L  V++Q LL+ K G GR    E+++ +P I +LIR  ++ 
Sbjct: 241 VDVFPAQEKSMIRSMLSESLHAVVSQALLK-KVGGGRVAAHEIMMGTPAIRNLIREDKVA 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSA 337
           ++ +++     +GMQT D  L  LV    I+ + A   A
Sbjct: 300 QMYSSIQTGGSMGMQTLDMCLADLVKKGLITRESARERA 338