Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., twitching motility protein from Synechococcus elongatus PCC 7942

 Score =  236 bits (602), Expect = 8e-67
 Identities = 136/337 (40%), Positives = 206/337 (61%), Gaps = 2/337 (0%)

Query: 13  HKASDLYITVGAPILYRVDGEL-RAQGEALSVADVTALLHAMMDDARQAEFKQTREANFA 71
           H  SD+++ VG    +R  GE+ +        A   A L  ++ +A+  EF+Q  + + A
Sbjct: 59  HDYSDVHLGVGEVPRFRDRGEIVQTTYPVTDTATFNAWLREVLTEAQVREFEQGLDFDGA 118

Query: 72  VVRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIAKRGLVLVVGATG 131
              D  R R++ F     P  V+R I  RI + +EL LP V +++    +GLVLV G TG
Sbjct: 119 TQYDFARVRINIFGSLRGPSMVMRLIPLRILSLDELSLPPVFRDICYYPKGLVLVTGPTG 178

Query: 132 SGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLDTESYEVALKNSL 191
           SGKSTT+AAM  + NQ    +I+T+EDPIEFVH+ +R ++ QREVG+ T  +E AL+ SL
Sbjct: 179 SGKSTTLAAMIDFINQEMAKNIITIEDPIEFVHQSQRSLIKQREVGVHTRQFEAALRASL 238

Query: 192 RQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERILHLVPKEQREQFL 251
           R+ PD+IL+GE+R RET+  A+  A+TGHL MATLH N+A + +ER+L++    ++    
Sbjct: 239 REDPDIILVGELRDRETINTALKAAQTGHLVMATLHTNSAVKTIERVLNMFEPAEQPPVR 298

Query: 252 LDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHELKATMARSQEVG 311
           + L+ +L  VIAQ L R  +GK R    E+L+N+  I D I RGEL E++  + +    G
Sbjct: 299 VALAESLVSVIAQGLCRTIHGK-RTAYHEILINTDAIKDYIIRGELEEVEQLIPKCTFDG 357

Query: 312 MQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLK 348
           M T +Q+L++L  + KISE+ AL  +   N++  ML+
Sbjct: 358 MCTSNQSLFRLFNEGKISEETALAQSGKPNEMSQMLR 394