Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., twitching motility protein from Synechococcus elongatus PCC 7942

 Score =  210 bits (535), Expect = 4e-59
 Identities = 132/337 (39%), Positives = 199/337 (59%), Gaps = 12/337 (3%)

Query: 14  KASDLYITVGAPILYRVDGELRA--QGEALSVADVTALLHAMMDDARQAEFKQTREANFA 71
           +ASD+++ VG P  +R+  ++       A + +D+ + L+ ++   + +   +T+E + A
Sbjct: 17  QASDIHLRVGHPPYFRLREQMYPLPNAPAATDSDMASWLNEILTPTQLSRLNETQELDEA 76

Query: 72  VVR-DSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAIAKRGLVLVVGAT 130
           +   D  R RV  F   +     +R I  +IP+  +L+LP VL  L   K+GL+LV G T
Sbjct: 77  LFYPDLIRCRVICFQTLDGVAITLRLIPLQIPSLMDLQLPTVLSALIQRKQGLILVTGPT 136

Query: 131 GSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGLDTESYEVALKNS 190
           GSGKSTT+AAM    NQ    HI+T+EDPIE+V E  RC++TQREVG     +  A++ +
Sbjct: 137 GSGKSTTLAAMISEMNQSMARHIITIEDPIEYVFEPVRCLITQREVGRHVHDFSSAVRAA 196

Query: 191 LRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERILHL----VPKEQ 246
           LR  PD+IL+GEIR ++T++ AM  A+TGHL + TLHA NA   ++R++ L       + 
Sbjct: 197 LRADPDVILVGEIRDQKTLKAAMHAAQTGHLVLGTLHARNAIATIDRLIGLDGMVQSADT 256

Query: 247 REQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELHELKATMAR 306
           R+QF L+L   L  VIAQQL+   +G  R  V EVL+N+P I D + RGEL E    M  
Sbjct: 257 RKQF-LEL---LVAVIAQQLITTYSG-SRRAVLEVLINTPAIQDYLTRGELDEAYRLMEL 311

Query: 307 SQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDL 343
               GMQT ++AL   +   ++S ++AL +A    DL
Sbjct: 312 DTIEGMQTLNEALITEIEQGRLSIEEALKAAVDPGDL 348