Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., type II secretion system protein E (NCBI) from Rhodospirillum rubrum S1H

 Score =  167 bits (424), Expect = 3e-46
 Identities = 117/324 (36%), Positives = 168/324 (51%), Gaps = 13/324 (4%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDG---ELRAQGEALSVADVTALLHAMMDDA 57
           M+L   L       ASDL++ VG     R+DG   E+  QG  +  + +  L+   +D  
Sbjct: 1   MDLTSLLRLAHQRSASDLHLAVGMAPSLRIDGRLSEMTPQGALIDRSAIMGLIAQALDQP 60

Query: 58  RQAEFKQTREANFAVVRDSG-----RFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEV 112
            +   ++  EA   +          R RV+A      P  V+R +  R P  E L LP  
Sbjct: 61  ARERLERLGEAEAMLSLPMAADPPLRVRVTACRALAGPTLVLRLLADRPPAAESLGLPPA 120

Query: 113 LQNLAIAKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVT 172
           +  L   + GL+L+ GA G+GK+TT A +    N+    HILTVEDP+EF H      VT
Sbjct: 121 ITALTGRRDGLILIAGAAGAGKTTTAACLIDTINRAGGRHILTVEDPVEFRHAPLGGPVT 180

Query: 173 QREVGLDTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNAN 232
           QREVG  T S+   L  +LR  PD++LIGEIR  +T+  A+  A TGHL +ATLHA +A 
Sbjct: 181 QREVGTHTASFAAGLTAALRADPDVVLIGEIRDPQTLALALRTAGTGHLVIATLHAASAA 240

Query: 233 QALERILHLVPKE----QREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRI 288
            A++R L L+  +     R+     L+  L  V+ Q+LL  + G GR G+F +LL SP +
Sbjct: 241 GAIDRALDLLSFDGGAPGRDAAREALATALAAVVYQRLLA-RRGGGRIGLFSLLLASPAV 299

Query: 289 ADLIRRGELHELKATMARSQEVGM 312
              IR G+  +L A M   + +GM
Sbjct: 300 KAAIRDGQTRQLPALMEIGRRLGM 323