Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., PilT/PilU family type 4a pilus ATPase from Rhodanobacter denitrificans MT42

 Score =  341 bits (874), Expect = 2e-98
 Identities = 176/370 (47%), Positives = 261/370 (70%), Gaps = 13/370 (3%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEA-LSVADVTALLHAMMDDARQ 59
           M++  +L  M+   ASD++++ GAP+  +V+G+L   G   L    V  + +++MD+ + 
Sbjct: 1   MDIGYFLKLMVDKGASDMFLSTGAPVNIKVEGKLYPLGNTGLPSGMVKKIAYSLMDEGQV 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            +F++  E N A+ V+++GRFR++ F QR   G VIR I++ IP+ ++L+LP + ++L +
Sbjct: 61  PQFERDLELNMALAVKEAGRFRINVFKQRGEVGMVIRAIKSEIPSIDQLQLPGIFRDLIM 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
             RGL+LVVGATGSGKSTT+AAM   RN +  GHILT+EDPIE++H HK+ IV QREVGL
Sbjct: 121 EPRGLILVVGATGSGKSTTLAAMLDQRNTNSPGHILTIEDPIEYLHRHKKSIVNQREVGL 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT SY  ALKN++R+APD+I+IGEIR  +TME A+ F+ETGHLC+ATLH+NNA+Q LERI
Sbjct: 181 DTHSYHEALKNAMREAPDVIMIGEIRDTDTMEAAIAFSETGHLCLATLHSNNADQTLERI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           L+  P+   +  L++L+LNL+ VI+Q+L+  K+G+ R    EVLLN+P I D+IRRG++H
Sbjct: 241 LNFFPESAHKNVLMNLALNLRAVISQRLVLGKDGR-RIPAAEVLLNTPLIRDMIRRGQIH 299

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRG------ 352
           E+K  M RS + GMQTFDQ+LY+L  + ++  ++AL+ +DS + L L ++   G      
Sbjct: 300 EIKEAMDRSLQEGMQTFDQSLYKLYKEGRVELEEALNKSDSRDGLALKIRLAEGGSSDEA 359

Query: 353 ----DDYGSG 358
               D YG G
Sbjct: 360 LAGNDPYGMG 369