Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., twitching motility protein PilU from Pseudomonas aeruginosa PA14

 Score =  417 bits (1072), Expect = e-121
 Identities = 214/365 (58%), Positives = 276/365 (75%), Gaps = 4/365 (1%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGEA-LSVADVTALLHAMMDDARQ 59
           ME  + L  M+    SDL+IT G P   +V+G +    +  LS       +  +M++ ++
Sbjct: 1   MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            +F +  E NFA+  R  GRFRVSAF+QR L G V+RRIET IPT EELKLPE+L+ LA+
Sbjct: 61  RDFAENHECNFAISARGIGRFRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLAL 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
            KRGLV+ VGATG+GKST++AAM GYRN++ TGHI+++EDPIE++H+H+ CIVTQREVGL
Sbjct: 121 TKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIEDPIEYIHQHQGCIVTQREVGL 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT+S+EVALKN+LRQAPD+I+IGE+RSRETM++A+ FAETGHLC+ATLHANNANQALERI
Sbjct: 181 DTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           +H  P ++  Q  +DLSLNLK ++AQQL+   +GKGR  V EVLLN+P  ADLIR+GE+H
Sbjct: 241 IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVH 300

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRGDDYGSG 358
           ELK  M RS E GMQTFDQALYQL    +I+ +DAL  ADSANDLRLM+K   G +  + 
Sbjct: 301 ELKPLMKRSTEQGMQTFDQALYQLYTQGEITYEDALAHADSANDLRLMIKL--GSESDAD 358

Query: 359 SLQNV 363
            L N+
Sbjct: 359 HLSNL 363