Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., twitching motility protein (RefSeq) from Shewanella loihica PV-4

 Score =  439 bits (1128), Expect = e-128
 Identities = 215/370 (58%), Positives = 290/370 (78%), Gaps = 2/370 (0%)

Query: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQGE-ALSVADVTALLHAMMDDARQ 59
           ME+  +L  M+  KASDL+IT G P   +VDGE+R   E   + A     + A+M +A++
Sbjct: 1   MEVRPFLKVMVERKASDLFITAGFPPSAKVDGEVRPLAENPFTPAQSLEFVEALMTEAQR 60

Query: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118
            EF +TRE NFA   +  GRFRVSAF+QRE PG V+RRIET+IP  E+LKLP +L++L +
Sbjct: 61  KEFHETRECNFAYGEKGLGRFRVSAFWQRESPGCVMRRIETKIPLVEDLKLPPILKDLVM 120

Query: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178
           +KRGL+++VG TG+GKST++AA+ GYRN H  GHILT+EDP+EFVH+H++ I+TQREVG+
Sbjct: 121 SKRGLIIMVGGTGTGKSTSLAALVGYRNSHARGHILTIEDPVEFVHDHRKSIITQREVGI 180

Query: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238
           DT+S++ ALK+SLRQAPD+ILIGEIR++ETME+A++FAETGHLCMATLHANNANQAL+RI
Sbjct: 181 DTDSFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI 240

Query: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298
           +HLVP+ + +Q L DLSLNL+G++AQQL+   +G GR    EVL+N+PR+A +I++ ELH
Sbjct: 241 MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKADGTGRRAAIEVLINTPRVASIIQKNELH 300

Query: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDALHSADSANDLRLMLKTKRGDDYGSG 358
            LK TMA+S E GMQTFDQAL +L V+ +IS  DALH ADS NDLRLM+K +  +   SG
Sbjct: 301 LLKETMAKSNEQGMQTFDQALLKLYVEGEISYSDALHHADSPNDLRLMIKLQSSESASSG 360

Query: 359 SLQNVKIDME 368
            ++ V +D++
Sbjct: 361 FMEGVTLDLD 370