Pairwise Alignments

Query, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Putative type II secretion system protein E from Enterobacter sp. TBS_079

 Score =  107 bits (267), Expect = 7e-28
 Identities = 97/279 (34%), Positives = 138/279 (49%), Gaps = 24/279 (8%)

Query: 3   LNQYLDGMLTHKASDLYITV---GAPILYRVDGELRA---QGEALSVADVTALLHAMMDD 56
           +N  L   +   ASD+YI        I +RVDG LR        L+   V+ +      D
Sbjct: 112 INAILGEAVKEGASDIYIETFERTLSIRFRVDGVLRPVLQPARKLAPLLVSRIKVMSRLD 171

Query: 57  ARQAEFKQTREANFAVVRDSGRFRVSAFFQRELPGAVIRRIETRI--PTFEELKL----P 110
             +    Q    +  + R +   RVS    +     V+R ++     P   +L L     
Sbjct: 172 IAEKRLPQDGRISLRIGRKAVDVRVSTIPSQYGERVVMRLLDKSNLKPDINKLGLIDEER 231

Query: 111 EVLQNLAIAKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCI 170
           E LQ L     G++LV G TGSGKSTT+ A+    N H   +ILTVEDPIE+  E     
Sbjct: 232 EKLQGLIDRPHGIILVTGPTGSGKSTTLYAILSALNGHER-NILTVEDPIEYELEG---- 286

Query: 171 VTQREVGLDTE-SYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHAN 229
           V Q +V    + ++   L+  LRQ PD+++IGEIR  ET + A+  + TGHL M+TLH N
Sbjct: 287 VGQTQVNPRVDMTFARGLRAILRQDPDVVMIGEIRDAETAQIAVQASLTGHLVMSTLHTN 346

Query: 230 NANQALERILHLVPKEQREQFLLDLSLNLKGVIAQQLLR 268
           +A  A+ R+  +      E FL+  S  L GVIAQ+L+R
Sbjct: 347 SAAGAITRLRDM----GLESFLIGSS--LLGVIAQRLVR 379